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PDB ID만 가지고 빠르게 PDB 파일 얻기

files.rcsb.org 이용

간단히 아래 URL에서 PDB_ID 부분만 원하는 PDB ID로 변경하면 된다. 끝!
https://files.rcsb.org/download/[PDB_ID].pdb
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PDB 외 다른 형식의 파일을 얻으려면?

File Format
Action
Storage Compression
Example URL
Biological Assembly File in PDB
Download
Uncompressed
Biological Assembly File in PDB
Download
Compressed
Biological Assembly File in PDBx/mmCIF
Download
Uncompressed
Biological Assembly File in PDBx/mmCIF
Download
Compressed
PDB
Download
Compressed
PDB
Download
Uncompressed
PDBx/BinaryCIF
Download
Compressed
PDBx/BinaryCIF
Download
Uncompressed
PDBx/mmCIF
Download
Compressed
PDBx/mmCIF
Download
Uncompressed
XML
Download
Compressed
XML
Download
Uncompressed
XML (header only)
Download
Compressed
XML (header only)
Download
Uncompressed
Biological Assembly File in PDB
View
Uncompressed
Biological Assembly File in PDBx/mmCIF
View
Uncompressed
PDB
View
Uncompressed
PDB (header only)
View
Uncompressed
PDBx/mmCIF
View
Uncompressed
PDBx/mmCIF (header only)
View
Uncompressed
XML (header only)
View
Uncompressed

Sequence 데이터를 FASTA 형식으로 얻을 수도 있다.

FASTA sequences per PDB entry
Download
Uncompressed
FASTA sequence per polymer entity (identified by <pdb_id>_<entity_id>)
Download
Uncompressed
FASTA sequence per polymer entity instance (chain) (identified by <pdb_id>.<asym_id>, please note this is the label_asym_id and not the author chain id)
Download
Uncompressed
Sequences in FASTA format for all entries in the PDB archive
Download
Compressed

See also